Yes it was the installation wizard I was trying to go through I would of remembered that if I could get into my dashboard my apologies. I am using the BP default theme with a WordPress dating plugin from datingsolutions.biz. It was the BuddyPress Template Pack and when it tried to move the files automatically it failed and showed me steps to do it manually, that’s why I used Filezilla.
In my dashboard, to update the buddypress plugin the next step was to move the template files as in each page, register, members, groups, forums, etc. I uploaded the files and moved those folders somewhere and now I don’t see them. In /public_html/wp-content/themes I only see smallbiz, twentyeleven,twentyten, and index.php folders.